Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SmoP56726 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.09■□□□□ 0.49
SmoP56726 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SmoP56726 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.09■□□□□ 0.49
SmoP56726 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Gm37292-201ENSMUST00000192062 758 ntBASIC18.09■□□□□ 0.49
SmoP56726 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.09■□□□□ 0.49
SmoP56726 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SmoP56726 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.08■□□□□ 0.49
SmoP56726 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SmoP56726 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SmoP56726 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SmoP56726 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SmoP56726 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SmoP56726 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SmoP56726 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.08■□□□□ 0.48
SmoP56726 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.08■□□□□ 0.48
SmoP56726 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SmoP56726 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SmoP56726 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SmoP56726 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SmoP56726 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SmoP56726 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.08■□□□□ 0.48
SmoP56726 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SmoP56726 Mir1199-201ENSMUST00000117015 119 ntBASIC18.07■□□□□ 0.48
SmoP56726 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.07■□□□□ 0.48
SmoP56726 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SmoP56726 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SmoP56726 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
SmoP56726 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SmoP56726 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SmoP56726 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
SmoP56726 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SmoP56726 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.06■□□□□ 0.48
SmoP56726 Gm6576-201ENSMUST00000169678 883 ntBASIC18.06■□□□□ 0.48
SmoP56726 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.06■□□□□ 0.48
SmoP56726 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.06■□□□□ 0.48
SmoP56726 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.06■□□□□ 0.48
SmoP56726 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.06■□□□□ 0.48
SmoP56726 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
SmoP56726 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SmoP56726 Fst-202ENSMUST00000223640 2612 ntBASIC18.05■□□□□ 0.48
SmoP56726 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.05■□□□□ 0.48
SmoP56726 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.05■□□□□ 0.48
SmoP56726 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SmoP56726 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SmoP56726 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SmoP56726 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.04■□□□□ 0.48
SmoP56726 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.04■□□□□ 0.48
SmoP56726 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SmoP56726 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SmoP56726 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SmoP56726 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SmoP56726 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms