Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh11P55288 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdh11P55288 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Cdh11P55288 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.39■□□□□ 0.21
Cdh11P55288 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Cdh11P55288 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.39■□□□□ 0.21
Cdh11P55288 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh11P55288 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdh11P55288 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.38■□□□□ 0.21
Cdh11P55288 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdh11P55288 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.38■□□□□ 0.21
Cdh11P55288 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdh11P55288 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.38■□□□□ 0.21
Cdh11P55288 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cdh11P55288 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Cdh11P55288 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh11P55288 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cdh11P55288 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh11P55288 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdh11P55288 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh11P55288 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cdh11P55288 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdh11P55288 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh11P55288 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh11P55288 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdh11P55288 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Cdh11P55288 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdh11P55288 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.36■□□□□ 0.21
Cdh11P55288 Gm13146-201ENSMUST00000118508 780 ntBASIC16.36■□□□□ 0.21
Cdh11P55288 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdh11P55288 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.36■□□□□ 0.21
Cdh11P55288 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.36■□□□□ 0.21
Cdh11P55288 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.36■□□□□ 0.21
Cdh11P55288 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Cdh11P55288 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdh11P55288 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdh11P55288 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh11P55288 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdh11P55288 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.35■□□□□ 0.21
Cdh11P55288 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh11P55288 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdh11P55288 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cdh11P55288 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms