Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Srp9P49962 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Srp9P49962 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Srp9P49962 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp9P49962 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Srp9P49962 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Srp9P49962 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Srp9P49962 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.3■□□□□ 0.04
Srp9P49962 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.3■□□□□ 0.04
Srp9P49962 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp9P49962 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp9P49962 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Srp9P49962 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Srp9P49962 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.29■□□□□ 0.04
Srp9P49962 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.29■□□□□ 0.04
Srp9P49962 Gm38205-201ENSMUST00000192243 258 ntBASIC15.29■□□□□ 0.04
Srp9P49962 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Srp9P49962 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp9P49962 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Srp9P49962 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.28■□□□□ 0.04
Srp9P49962 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.28■□□□□ 0.04
Srp9P49962 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.28■□□□□ 0.04
Srp9P49962 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.28■□□□□ 0.04
Srp9P49962 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.28■□□□□ 0.04
Srp9P49962 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Srp9P49962 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp9P49962 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.27■□□□□ 0.04
Srp9P49962 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp9P49962 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Srp9P49962 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Srp9P49962 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.27■□□□□ 0.03
Srp9P49962 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp9P49962 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms