Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.43■□□□□ 0.86
Atoh1P48985 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.43■□□□□ 0.86
Atoh1P48985 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.43■□□□□ 0.86
Atoh1P48985 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Atoh1P48985 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atoh1P48985 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atoh1P48985 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atoh1P48985 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Atoh1P48985 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Atoh1P48985 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atoh1P48985 Gm13474-201ENSMUST00000122466 815 ntBASIC20.42■□□□□ 0.86
Atoh1P48985 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Atoh1P48985 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.42■□□□□ 0.86
Atoh1P48985 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.42■□□□□ 0.86
Atoh1P48985 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atoh1P48985 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Atoh1P48985 Gm7461-201ENSMUST00000058918 827 ntBASIC20.42■□□□□ 0.86
Atoh1P48985 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Atoh1P48985 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Atoh1P48985 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.41■□□□□ 0.86
Atoh1P48985 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.41■□□□□ 0.86
Atoh1P48985 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.41■□□□□ 0.86
Atoh1P48985 Gm5587-201ENSMUST00000206270 674 ntBASIC20.41■□□□□ 0.86
Atoh1P48985 Gm21559-201ENSMUST00000220638 855 ntBASIC20.41■□□□□ 0.86
Atoh1P48985 Gm8587-201ENSMUST00000076538 843 ntBASIC20.41■□□□□ 0.86
Atoh1P48985 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Atoh1P48985 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atoh1P48985 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.4■□□□□ 0.86
Atoh1P48985 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Atoh1P48985 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.4■□□□□ 0.86
Atoh1P48985 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Atoh1P48985 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Gm27389-201ENSMUST00000183622 195 ntBASIC20.4■□□□□ 0.86
Atoh1P48985 Gm28033-201ENSMUST00000184224 96 ntBASIC20.4■□□□□ 0.86
Atoh1P48985 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Atoh1P48985 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Atoh1P48985 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atoh1P48985 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atoh1P48985 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Atoh1P48985 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Atoh1P48985 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.39■□□□□ 0.86
Atoh1P48985 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Atoh1P48985 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.39■□□□□ 0.86
Atoh1P48985 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.39■□□□□ 0.85
Atoh1P48985 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.39■□□□□ 0.85
Atoh1P48985 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.39■□□□□ 0.85
Atoh1P48985 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Atoh1P48985 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Atoh1P48985 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atoh1P48985 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.38■□□□□ 0.85
Atoh1P48985 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Atoh1P48985 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Atoh1P48985 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Atoh1P48985 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atoh1P48985 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atoh1P48985 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms