Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx2P48379 Flg-201ENSMUST00000050758 1488 ntBASIC18.85■□□□□ 0.61
Rfx2P48379 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.85■□□□□ 0.61
Rfx2P48379 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx2P48379 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rfx2P48379 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx2P48379 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx2P48379 Gm6576-201ENSMUST00000169678 883 ntBASIC18.85■□□□□ 0.61
Rfx2P48379 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.85■□□□□ 0.61
Rfx2P48379 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.85■□□□□ 0.61
Rfx2P48379 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.85■□□□□ 0.61
Rfx2P48379 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx2P48379 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfx2P48379 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rfx2P48379 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rfx2P48379 Gm13158-201ENSMUST00000122007 736 ntBASIC18.84■□□□□ 0.61
Rfx2P48379 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rfx2P48379 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx2P48379 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx2P48379 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx2P48379 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx2P48379 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx2P48379 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx2P48379 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.83■□□□□ 0.61
Rfx2P48379 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.83■□□□□ 0.6
Rfx2P48379 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx2P48379 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rfx2P48379 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.83■□□□□ 0.6
Rfx2P48379 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx2P48379 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx2P48379 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx2P48379 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.83■□□□□ 0.6
Rfx2P48379 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx2P48379 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx2P48379 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx2P48379 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.82■□□□□ 0.6
Rfx2P48379 Gm15378-201ENSMUST00000121894 207 ntBASIC18.82■□□□□ 0.6
Rfx2P48379 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx2P48379 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx2P48379 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.82■□□□□ 0.6
Rfx2P48379 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rfx2P48379 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.82■□□□□ 0.6
Rfx2P48379 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Rfx2P48379 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx2P48379 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.81■□□□□ 0.6
Rfx2P48379 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rfx2P48379 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.81■□□□□ 0.6
Rfx2P48379 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rfx2P48379 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx2P48379 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Rfx2P48379 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx2P48379 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx2P48379 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfx2P48379 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.8■□□□□ 0.6
Rfx2P48379 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.8■□□□□ 0.6
Rfx2P48379 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx2P48379 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Rfx2P48379 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.8■□□□□ 0.6
Rfx2P48379 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx2P48379 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rfx2P48379 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx2P48379 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx2P48379 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rfx2P48379 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Gm22325-201ENSMUST00000158904 308 ntBASIC18.79■□□□□ 0.6
Rfx2P48379 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.79■□□□□ 0.6
Rfx2P48379 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms