Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HttP42859 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HttP42859 Gm15794-201ENSMUST00000120182 631 ntBASIC19.38■□□□□ 0.69
HttP42859 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HttP42859 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HttP42859 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.38■□□□□ 0.69
HttP42859 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HttP42859 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HttP42859 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HttP42859 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HttP42859 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HttP42859 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.38■□□□□ 0.69
HttP42859 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.37■□□□□ 0.69
HttP42859 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.37■□□□□ 0.69
HttP42859 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HttP42859 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HttP42859 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.36■□□□□ 0.69
HttP42859 Gm18206-201ENSMUST00000207027 926 ntBASIC19.36■□□□□ 0.69
HttP42859 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Gm10566-201ENSMUST00000086739 996 ntBASIC19.36■□□□□ 0.69
HttP42859 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.36■□□□□ 0.69
HttP42859 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HttP42859 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.36■□□□□ 0.69
HttP42859 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.36■□□□□ 0.69
HttP42859 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.35■□□□□ 0.69
HttP42859 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HttP42859 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HttP42859 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.35■□□□□ 0.69
HttP42859 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HttP42859 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.34■□□□□ 0.69
HttP42859 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HttP42859 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HttP42859 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HttP42859 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HttP42859 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HttP42859 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HttP42859 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HttP42859 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HttP42859 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HttP42859 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HttP42859 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HttP42859 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HttP42859 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
HttP42859 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HttP42859 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HttP42859 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HttP42859 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.32■□□□□ 0.68
HttP42859 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HttP42859 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HttP42859 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HttP42859 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HttP42859 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HttP42859 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HttP42859 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms