Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cd9P40240 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.78■□□□□ 0.44
Cd9P40240 Gm5408-201ENSMUST00000197998 747 ntBASIC17.78■□□□□ 0.44
Cd9P40240 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Dio3-201ENSMUST00000097228 1449 ntBASIC17.78■□□□□ 0.44
Cd9P40240 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd9P40240 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cd9P40240 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cd9P40240 Gm10418-201ENSMUST00000100943 576 ntBASIC17.77■□□□□ 0.44
Cd9P40240 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.77■□□□□ 0.44
Cd9P40240 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.77■□□□□ 0.44
Cd9P40240 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd9P40240 Mir2861-201ENSMUST00000175539 82 ntBASIC17.77■□□□□ 0.44
Cd9P40240 Gm4968-201ENSMUST00000071458 858 ntBASIC17.77■□□□□ 0.44
Cd9P40240 Gm10602-201ENSMUST00000098239 609 ntBASIC17.77■□□□□ 0.44
Cd9P40240 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd9P40240 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd9P40240 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Cd9P40240 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd9P40240 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.77■□□□□ 0.43
Cd9P40240 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd9P40240 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.77■□□□□ 0.43
Cd9P40240 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.76■□□□□ 0.43
Cd9P40240 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cd9P40240 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Gm2559-201ENSMUST00000201323 363 ntBASIC17.76■□□□□ 0.43
Cd9P40240 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd9P40240 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.75■□□□□ 0.43
Cd9P40240 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.75■□□□□ 0.43
Cd9P40240 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.75■□□□□ 0.43
Cd9P40240 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd9P40240 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd9P40240 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Cd9P40240 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd9P40240 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cd9P40240 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd9P40240 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd9P40240 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.73■□□□□ 0.43
Cd9P40240 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd9P40240 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Cd9P40240 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd9P40240 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cd9P40240 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Mir6349-201ENSMUST00000184059 97 ntBASIC17.72■□□□□ 0.43
Cd9P40240 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cd9P40240 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd9P40240 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.71■□□□□ 0.43
Cd9P40240 Gm29791-202ENSMUST00000207888 369 ntBASIC17.71■□□□□ 0.43
Cd9P40240 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms