Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Gm18958-201ENSMUST00000174258 762 ntBASIC18.6■□□□□ 0.57
Cxcl12P40224 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cxcl12P40224 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cxcl12P40224 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cxcl12P40224 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cxcl12P40224 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cxcl12P40224 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cxcl12P40224 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cxcl12P40224 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.59■□□□□ 0.57
Cxcl12P40224 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.59■□□□□ 0.57
Cxcl12P40224 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cxcl12P40224 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cxcl12P40224 Gm17808-201ENSMUST00000200859 894 ntBASIC18.59■□□□□ 0.57
Cxcl12P40224 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Cxcl12P40224 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cxcl12P40224 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.58■□□□□ 0.57
Cxcl12P40224 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.58■□□□□ 0.56
Cxcl12P40224 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.58■□□□□ 0.56
Cxcl12P40224 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.58■□□□□ 0.56
Cxcl12P40224 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cxcl12P40224 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cxcl12P40224 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cxcl12P40224 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cxcl12P40224 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Cxcl12P40224 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cxcl12P40224 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cxcl12P40224 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cxcl12P40224 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cxcl12P40224 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cxcl12P40224 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cxcl12P40224 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.57■□□□□ 0.56
Cxcl12P40224 Mir1668-201ENSMUST00000184114 107 ntBASIC18.57■□□□□ 0.56
Cxcl12P40224 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Gm5867-201ENSMUST00000063197 592 ntBASIC18.57■□□□□ 0.56
Cxcl12P40224 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcl12P40224 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cxcl12P40224 Gm7638-201ENSMUST00000121348 967 ntBASIC18.56■□□□□ 0.56
Cxcl12P40224 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.56■□□□□ 0.56
Cxcl12P40224 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cxcl12P40224 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcl12P40224 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcl12P40224 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.56■□□□□ 0.56
Cxcl12P40224 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcl12P40224 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcl12P40224 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcl12P40224 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.55■□□□□ 0.56
Cxcl12P40224 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.55■□□□□ 0.56
Cxcl12P40224 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.55■□□□□ 0.56
Cxcl12P40224 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cxcl12P40224 Gm7791-201ENSMUST00000219066 539 ntBASIC18.55■□□□□ 0.56
Cxcl12P40224 Mzt1-203ENSMUST00000227948 952 ntBASIC18.55■□□□□ 0.56
Cxcl12P40224 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cxcl12P40224 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.55■□□□□ 0.56
Cxcl12P40224 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcl12P40224 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.54■□□□□ 0.56
Cxcl12P40224 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cxcl12P40224 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.54■□□□□ 0.56
Cxcl12P40224 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Cxcl12P40224 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cxcl12P40224 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcl12P40224 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cxcl12P40224 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Gm7370-201ENSMUST00000219471 767 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms