Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.42■□□□□ 0.54
Mmp13P33435 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Mmp13P33435 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Mmp13P33435 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.41■□□□□ 0.54
Mmp13P33435 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Mmp13P33435 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.41■□□□□ 0.54
Mmp13P33435 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Mmp13P33435 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Mmp13P33435 Gm13534-201ENSMUST00000121169 513 ntBASIC18.41■□□□□ 0.54
Mmp13P33435 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Mmp13P33435 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Mmp13P33435 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Mmp13P33435 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.41■□□□□ 0.54
Mmp13P33435 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp13P33435 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.4■□□□□ 0.54
Mmp13P33435 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mmp13P33435 Nespas-201ENSMUST00000143738 1083 ntBASIC18.4■□□□□ 0.54
Mmp13P33435 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp13P33435 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Mmp13P33435 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.39■□□□□ 0.53
Mmp13P33435 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Mmp13P33435 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Mmp13P33435 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Mmp13P33435 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp13P33435 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.38■□□□□ 0.53
Mmp13P33435 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Mmp13P33435 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.38■□□□□ 0.53
Mmp13P33435 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Mmp13P33435 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Mmp13P33435 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Mmp13P33435 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp13P33435 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Gm12933-201ENSMUST00000120203 872 ntBASIC18.37■□□□□ 0.53
Mmp13P33435 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.37■□□□□ 0.53
Mmp13P33435 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.37■□□□□ 0.53
Mmp13P33435 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Tgds-204ENSMUST00000228543 1594 ntBASIC18.37■□□□□ 0.53
Mmp13P33435 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp13P33435 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Mmp13P33435 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Mmp13P33435 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.36■□□□□ 0.53
Mmp13P33435 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp13P33435 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp13P33435 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp13P33435 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Mmp13P33435 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp13P33435 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp13P33435 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp13P33435 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.35■□□□□ 0.53
Mmp13P33435 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.35■□□□□ 0.53
Mmp13P33435 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp13P33435 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp13P33435 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms