Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp53P15975 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp53P15975 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp53P15975 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp53P15975 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Mir2861-201ENSMUST00000175539 82 ntBASIC20.84■□□□□ 0.93
Usp53P15975 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Usp53P15975 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Tgds-204ENSMUST00000228543 1594 ntBASIC20.84■□□□□ 0.93
Usp53P15975 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp53P15975 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp53P15975 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp53P15975 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp53P15975 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Usp53P15975 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.83■□□□□ 0.93
Usp53P15975 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.83■□□□□ 0.93
Usp53P15975 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.83■□□□□ 0.93
Usp53P15975 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.83■□□□□ 0.93
Usp53P15975 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp53P15975 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp53P15975 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp53P15975 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp53P15975 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp53P15975 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Usp53P15975 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp53P15975 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.82■□□□□ 0.92
Usp53P15975 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp53P15975 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.82■□□□□ 0.92
Usp53P15975 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp53P15975 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp53P15975 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Usp53P15975 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp53P15975 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Mir6349-201ENSMUST00000184059 97 ntBASIC20.81■□□□□ 0.92
Usp53P15975 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp53P15975 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp53P15975 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Usp53P15975 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Usp53P15975 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp53P15975 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp53P15975 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Usp53P15975 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp53P15975 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp53P15975 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp53P15975 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp53P15975 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Usp53P15975 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.79■□□□□ 0.92
Usp53P15975 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp53P15975 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp53P15975 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp53P15975 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp53P15975 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp53P15975 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.78■□□□□ 0.92
Usp53P15975 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp53P15975 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp53P15975 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp53P15975 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp53P15975 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp53P15975 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp53P15975 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.77■□□□□ 0.92
Usp53P15975 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp53P15975 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp53P15975 Gm37055-201ENSMUST00000191866 133 ntBASIC20.77■□□□□ 0.92
Usp53P15975 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.77■□□□□ 0.92
Usp53P15975 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp53P15975 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms