Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.05■□□□□ 0.32
ApoeP08226 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.05■□□□□ 0.32
ApoeP08226 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.04■□□□□ 0.32
ApoeP08226 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.04■□□□□ 0.32
ApoeP08226 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ApoeP08226 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.04■□□□□ 0.32
ApoeP08226 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
ApoeP08226 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ApoeP08226 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.03■□□□□ 0.32
ApoeP08226 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ApoeP08226 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ApoeP08226 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ApoeP08226 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ApoeP08226 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.02■□□□□ 0.32
ApoeP08226 Gm8493-201ENSMUST00000196881 489 ntBASIC17.02■□□□□ 0.32
ApoeP08226 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ApoeP08226 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.02■□□□□ 0.32
ApoeP08226 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ApoeP08226 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ApoeP08226 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ApoeP08226 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ApoeP08226 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
ApoeP08226 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ApoeP08226 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ApoeP08226 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
ApoeP08226 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
ApoeP08226 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
ApoeP08226 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.01■□□□□ 0.31
ApoeP08226 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ApoeP08226 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ApoeP08226 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ApoeP08226 Gm43338-201ENSMUST00000198617 2223 ntBASIC17■□□□□ 0.31
ApoeP08226 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17■□□□□ 0.31
ApoeP08226 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17■□□□□ 0.31
ApoeP08226 Gm43672-201ENSMUST00000199072 1731 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms