Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.87■□□□□ 0.29
Col4a2P08122 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.87■□□□□ 0.29
Col4a2P08122 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col4a2P08122 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col4a2P08122 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.87■□□□□ 0.29
Col4a2P08122 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a2P08122 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.86■□□□□ 0.29
Col4a2P08122 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 AA414768-201ENSMUST00000121924 1257 ntBASIC16.86■□□□□ 0.29
Col4a2P08122 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.86■□□□□ 0.29
Col4a2P08122 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col4a2P08122 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col4a2P08122 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a2P08122 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.85■□□□□ 0.29
Col4a2P08122 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a2P08122 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a2P08122 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.84■□□□□ 0.29
Col4a2P08122 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a2P08122 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a2P08122 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.84■□□□□ 0.29
Col4a2P08122 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a2P08122 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a2P08122 Tgds-204ENSMUST00000228543 1594 ntBASIC16.83■□□□□ 0.28
Col4a2P08122 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col4a2P08122 Gm27463-201ENSMUST00000183569 57 ntBASIC16.83■□□□□ 0.28
Col4a2P08122 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.83■□□□□ 0.28
Col4a2P08122 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.83■□□□□ 0.28
Col4a2P08122 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col4a2P08122 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.82■□□□□ 0.28
Col4a2P08122 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col4a2P08122 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.82■□□□□ 0.28
Col4a2P08122 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.82■□□□□ 0.28
Col4a2P08122 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Col4a2P08122 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Col4a2P08122 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a2P08122 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.82■□□□□ 0.28
Col4a2P08122 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a2P08122 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a2P08122 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.81■□□□□ 0.28
Col4a2P08122 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a2P08122 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a2P08122 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a2P08122 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a2P08122 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a2P08122 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms