Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Tgds-204ENSMUST00000228543 1594 ntBASIC16.61■□□□□ 0.25
P06336 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.61■□□□□ 0.25
P06336 Zfp783-201ENSMUST00000095946 670 ntBASIC16.61■□□□□ 0.25
P06336 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P06336 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P06336 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
P06336 Gm11927-201ENSMUST00000118472 759 ntBASIC16.6■□□□□ 0.25
P06336 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
P06336 Gm27275-201ENSMUST00000184318 272 ntBASIC16.6■□□□□ 0.25
P06336 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.6■□□□□ 0.25
P06336 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P06336 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
P06336 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P06336 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06336 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Gm38285-201ENSMUST00000192928 922 ntBASIC16.59■□□□□ 0.25
P06336 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.59■□□□□ 0.25
P06336 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Fst-202ENSMUST00000223640 2612 ntBASIC16.59■□□□□ 0.25
P06336 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.59■□□□□ 0.25
P06336 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06336 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
P06336 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
P06336 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
P06336 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.58■□□□□ 0.24
P06336 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.58■□□□□ 0.24
P06336 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
P06336 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
P06336 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P06336 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P06336 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
P06336 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
P06336 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P06336 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.57■□□□□ 0.24
P06336 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P06336 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.57■□□□□ 0.24
P06336 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.57■□□□□ 0.24
P06336 Gm37856-201ENSMUST00000191634 999 ntBASIC16.57■□□□□ 0.24
P06336 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
P06336 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
P06336 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
P06336 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
P06336 Gm11249-201ENSMUST00000117071 859 ntBASIC16.56■□□□□ 0.24
P06336 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Trmt13-210ENSMUST00000198454 880 ntBASIC16.56■□□□□ 0.24
P06336 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P06336 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms