Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.79■□□□□ 0.12
P04224 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
P04224 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
P04224 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
P04224 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
P04224 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
P04224 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
P04224 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
P04224 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
P04224 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
P04224 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.77■□□□□ 0.12
P04224 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.77■□□□□ 0.12
P04224 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.77■□□□□ 0.12
P04224 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.77■□□□□ 0.12
P04224 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.77■□□□□ 0.12
P04224 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04224 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
P04224 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
P04224 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
P04224 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
P04224 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.77■□□□□ 0.11
P04224 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
P04224 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.76■□□□□ 0.11
P04224 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.76■□□□□ 0.11
P04224 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
P04224 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04224 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04224 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04224 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04224 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
P04224 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04224 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.75■□□□□ 0.11
P04224 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.75■□□□□ 0.11
P04224 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.75■□□□□ 0.11
P04224 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
P04224 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
P04224 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
P04224 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.74■□□□□ 0.11
P04224 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
P04224 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Spcs1-204ENSMUST00000226782 949 ntBASIC15.74■□□□□ 0.11
P04224 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
P04224 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.74■□□□□ 0.11
P04224 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
P04224 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.74■□□□□ 0.11
P04224 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04224 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
P04224 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms