Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.26■□□□□ 0.35
P04213 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04213 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.25■□□□□ 0.35
P04213 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.25■□□□□ 0.35
P04213 Gm13148-201ENSMUST00000118892 745 ntBASIC17.25■□□□□ 0.35
P04213 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
P04213 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.25■□□□□ 0.35
P04213 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.25■□□□□ 0.35
P04213 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.25■□□□□ 0.35
P04213 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04213 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.24■□□□□ 0.35
P04213 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04213 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P04213 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
P04213 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
P04213 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.23■□□□□ 0.35
P04213 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.23■□□□□ 0.35
P04213 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.23■□□□□ 0.35
P04213 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.23■□□□□ 0.35
P04213 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.23■□□□□ 0.35
P04213 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04213 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.22■□□□□ 0.35
P04213 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Gm27405-201ENSMUST00000184201 112 ntBASIC17.22■□□□□ 0.35
P04213 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.22■□□□□ 0.35
P04213 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P04213 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Idnk-204ENSMUST00000226010 1898 ntBASIC17.22■□□□□ 0.35
P04213 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04213 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
P04213 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
P04213 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Gm7290-201ENSMUST00000104990 617 ntBASIC17.21■□□□□ 0.35
P04213 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Gm12918-201ENSMUST00000120234 636 ntBASIC17.21■□□□□ 0.35
P04213 Gm15710-201ENSMUST00000121821 636 ntBASIC17.21■□□□□ 0.35
P04213 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.21■□□□□ 0.35
P04213 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.21■□□□□ 0.35
P04213 Gm5075-201ENSMUST00000196916 622 ntBASIC17.21■□□□□ 0.35
P04213 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.21■□□□□ 0.35
P04213 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.21■□□□□ 0.35
P04213 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04213 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.21■□□□□ 0.35
P04213 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
P04213 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
P04213 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
P04213 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04213 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04213 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04213 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04213 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.2■□□□□ 0.34
P04213 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04213 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04213 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.2■□□□□ 0.34
P04213 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
P04213 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms