Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.49■□□□□ 0.39
ClppO88696 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.49■□□□□ 0.39
ClppO88696 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ClppO88696 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.48■□□□□ 0.39
ClppO88696 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ClppO88696 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.48■□□□□ 0.39
ClppO88696 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ClppO88696 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ClppO88696 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ClppO88696 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.48■□□□□ 0.39
ClppO88696 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClppO88696 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ClppO88696 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ClppO88696 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ClppO88696 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.47■□□□□ 0.39
ClppO88696 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.47■□□□□ 0.39
ClppO88696 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClppO88696 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ClppO88696 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.46■□□□□ 0.39
ClppO88696 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.46■□□□□ 0.39
ClppO88696 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ClppO88696 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ClppO88696 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClppO88696 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ClppO88696 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Gm11249-201ENSMUST00000117071 859 ntBASIC17.45■□□□□ 0.38
ClppO88696 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ClppO88696 Gm6576-201ENSMUST00000169678 883 ntBASIC17.45■□□□□ 0.38
ClppO88696 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.45■□□□□ 0.38
ClppO88696 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ClppO88696 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClppO88696 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.44■□□□□ 0.38
ClppO88696 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.44■□□□□ 0.38
ClppO88696 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.44■□□□□ 0.38
ClppO88696 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.44■□□□□ 0.38
ClppO88696 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ClppO88696 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ClppO88696 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ClppO88696 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClppO88696 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms