Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
Tgfbr3O88393 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.13■□□□□ 0.33
Tgfbr3O88393 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfbr3O88393 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfbr3O88393 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfbr3O88393 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfbr3O88393 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfbr3O88393 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfbr3O88393 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Tgfbr3O88393 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfbr3O88393 Gm10517-202ENSMUST00000192970 758 ntBASIC17.11■□□□□ 0.33
Tgfbr3O88393 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfbr3O88393 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfbr3O88393 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfbr3O88393 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Gm23634-201ENSMUST00000175071 91 ntBASIC17.1■□□□□ 0.33
Tgfbr3O88393 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfbr3O88393 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.09■□□□□ 0.33
Tgfbr3O88393 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gm27463-201ENSMUST00000183569 57 ntBASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfbr3O88393 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.08■□□□□ 0.33
Tgfbr3O88393 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tgfbr3O88393 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tgfbr3O88393 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tgfbr3O88393 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.08■□□□□ 0.32
Tgfbr3O88393 Gm45058-201ENSMUST00000205810 766 ntBASIC17.08■□□□□ 0.32
Tgfbr3O88393 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Gm18032-201ENSMUST00000222541 538 ntBASIC17.08■□□□□ 0.32
Tgfbr3O88393 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tgfbr3O88393 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tgfbr3O88393 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Tgfbr3O88393 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tgfbr3O88393 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.06■□□□□ 0.32
Tgfbr3O88393 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.06■□□□□ 0.32
Tgfbr3O88393 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.06■□□□□ 0.32
Tgfbr3O88393 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tgfbr3O88393 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms