Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rdh5O55240 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.06■□□□□ 0.32
Rdh5O55240 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rdh5O55240 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rdh5O55240 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.05■□□□□ 0.32
Rdh5O55240 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rdh5O55240 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.05■□□□□ 0.32
Rdh5O55240 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.05■□□□□ 0.32
Rdh5O55240 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.05■□□□□ 0.32
Rdh5O55240 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rdh5O55240 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rdh5O55240 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Rdh5O55240 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.04■□□□□ 0.32
Rdh5O55240 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.04■□□□□ 0.32
Rdh5O55240 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.04■□□□□ 0.32
Rdh5O55240 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.04■□□□□ 0.32
Rdh5O55240 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rdh5O55240 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rdh5O55240 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.03■□□□□ 0.32
Rdh5O55240 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
Rdh5O55240 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rdh5O55240 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rdh5O55240 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rdh5O55240 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.02■□□□□ 0.32
Rdh5O55240 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rdh5O55240 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rdh5O55240 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rdh5O55240 Gm26524-201ENSMUST00000192339 390 ntBASIC17.02■□□□□ 0.32
Rdh5O55240 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rdh5O55240 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rdh5O55240 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rdh5O55240 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rdh5O55240 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rdh5O55240 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.02■□□□□ 0.31
Rdh5O55240 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.02■□□□□ 0.31
Rdh5O55240 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.01■□□□□ 0.31
Rdh5O55240 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Gm4968-201ENSMUST00000071458 858 ntBASIC17.01■□□□□ 0.31
Rdh5O55240 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.01■□□□□ 0.31
Rdh5O55240 Rarb-207ENSMUST00000225921 2756 ntBASIC17.01■□□□□ 0.31
Rdh5O55240 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rdh5O55240 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rdh5O55240 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rdh5O55240 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rdh5O55240 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17■□□□□ 0.31
Rdh5O55240 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rdh5O55240 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17■□□□□ 0.31
Rdh5O55240 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh5O55240 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms