Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm6211-202ENSMUST00000167849 925 ntBASIC18.79■□□□□ 0.6
Per2O54943 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Per2O54943 Gm27405-201ENSMUST00000184201 112 ntBASIC18.79■□□□□ 0.6
Per2O54943 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Per2O54943 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Per2O54943 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Per2O54943 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Per2O54943 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Per2O54943 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Per2O54943 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Per2O54943 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Per2O54943 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Per2O54943 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Per2O54943 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.78■□□□□ 0.6
Per2O54943 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Per2O54943 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Per2O54943 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Per2O54943 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Per2O54943 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.77■□□□□ 0.6
Per2O54943 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.77■□□□□ 0.6
Per2O54943 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.77■□□□□ 0.6
Per2O54943 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.77■□□□□ 0.6
Per2O54943 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Per2O54943 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Per2O54943 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Per2O54943 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Per2O54943 Rarb-207ENSMUST00000225921 2756 ntBASIC18.76■□□□□ 0.59
Per2O54943 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Per2O54943 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Per2O54943 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Per2O54943 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Per2O54943 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Per2O54943 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Per2O54943 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Per2O54943 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Per2O54943 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Per2O54943 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.75■□□□□ 0.59
Per2O54943 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Per2O54943 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Per2O54943 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.75■□□□□ 0.59
Per2O54943 Gm7291-201ENSMUST00000199147 382 ntBASIC18.75■□□□□ 0.59
Per2O54943 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Per2O54943 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Per2O54943 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Per2O54943 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.74■□□□□ 0.59
Per2O54943 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.74■□□□□ 0.59
Per2O54943 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
Per2O54943 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Per2O54943 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Per2O54943 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Per2O54943 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.73■□□□□ 0.59
Per2O54943 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Per2O54943 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Per2O54943 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Per2O54943 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Per2O54943 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Per2O54943 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Per2O54943 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Per2O54943 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per2O54943 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Per2O54943 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms