Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.69■□□□□ 0.42
Bhlhe40O35185 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.69■□□□□ 0.42
Bhlhe40O35185 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Bhlhe40O35185 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.69■□□□□ 0.42
Bhlhe40O35185 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.68■□□□□ 0.42
Bhlhe40O35185 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Mir6349-201ENSMUST00000184059 97 ntBASIC17.68■□□□□ 0.42
Bhlhe40O35185 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Bhlhe40O35185 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bhlhe40O35185 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.67■□□□□ 0.42
Bhlhe40O35185 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bhlhe40O35185 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bhlhe40O35185 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Golph3-205ENSMUST00000228671 2842 ntBASIC17.65■□□□□ 0.42
Bhlhe40O35185 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Mir2861-201ENSMUST00000175539 82 ntBASIC17.65■□□□□ 0.42
Bhlhe40O35185 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.65■□□□□ 0.42
Bhlhe40O35185 Gm5417-201ENSMUST00000079706 384 ntBASIC17.65■□□□□ 0.42
Bhlhe40O35185 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bhlhe40O35185 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bhlhe40O35185 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bhlhe40O35185 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bhlhe40O35185 Gm12382-201ENSMUST00000122005 922 ntBASIC17.64■□□□□ 0.41
Bhlhe40O35185 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.64■□□□□ 0.41
Bhlhe40O35185 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.64■□□□□ 0.41
Bhlhe40O35185 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Bhlhe40O35185 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bhlhe40O35185 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms