Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ClockO08785 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.09■□□□□ 0.33
ClockO08785 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ClockO08785 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.09■□□□□ 0.33
ClockO08785 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.09■□□□□ 0.33
ClockO08785 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClockO08785 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClockO08785 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ClockO08785 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClockO08785 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ClockO08785 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClockO08785 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.08■□□□□ 0.32
ClockO08785 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.08■□□□□ 0.32
ClockO08785 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.08■□□□□ 0.32
ClockO08785 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ClockO08785 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ClockO08785 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ClockO08785 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClockO08785 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ClockO08785 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ClockO08785 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.07■□□□□ 0.32
ClockO08785 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClockO08785 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ClockO08785 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ClockO08785 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.06■□□□□ 0.32
ClockO08785 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.06■□□□□ 0.32
ClockO08785 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.06■□□□□ 0.32
ClockO08785 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Gm13241-201ENSMUST00000094493 780 ntBASIC17.06■□□□□ 0.32
ClockO08785 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ClockO08785 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.06■□□□□ 0.32
ClockO08785 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClockO08785 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ClockO08785 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.05■□□□□ 0.32
ClockO08785 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ClockO08785 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ClockO08785 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ClockO08785 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClockO08785 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms