Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm3727J3QM54 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Gm3727J3QM54 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3727J3QM54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3727J3QM54 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3727J3QM54 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3727J3QM54 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm3727J3QM54 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gm3727J3QM54 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm3727J3QM54 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3727J3QM54 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.31■□□□□ 0.04
Gm3727J3QM54 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3727J3QM54 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Gm7860-201ENSMUST00000121190 879 ntBASIC15.3■□□□□ 0.04
Gm3727J3QM54 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3727J3QM54 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3727J3QM54 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms