Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Gm43183-201ENSMUST00000200632 547 ntBASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Gm37292-201ENSMUST00000192062 758 ntBASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb9E9Q5G2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb9E9Q5G2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb9E9Q5G2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb9E9Q5G2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb9E9Q5G2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb9E9Q5G2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Mir1199-201ENSMUST00000117015 119 ntBASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Gm10252-201ENSMUST00000209541 832 ntBASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb9E9Q5G2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms