Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Gm28659-201ENSMUST00000188013 759 ntBASIC28.7■■■□□ 2.18
Ift140E9PY46 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC28.7■■■□□ 2.18
Ift140E9PY46 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Ift140E9PY46 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Ift140E9PY46 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC28.69■■■□□ 2.18
Ift140E9PY46 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC28.69■■■□□ 2.18
Ift140E9PY46 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Ift140E9PY46 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ift140E9PY46 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
Ift140E9PY46 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
Ift140E9PY46 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Ift140E9PY46 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Ift140E9PY46 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ift140E9PY46 Gm13884-201ENSMUST00000118103 829 ntBASIC28.67■■■□□ 2.18
Ift140E9PY46 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC28.67■■■□□ 2.18
Ift140E9PY46 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC28.67■■■□□ 2.18
Ift140E9PY46 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ift140E9PY46 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC28.67■■■□□ 2.18
Ift140E9PY46 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ift140E9PY46 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ift140E9PY46 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ift140E9PY46 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ift140E9PY46 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ift140E9PY46 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC28.66■■■□□ 2.18
Ift140E9PY46 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Ift140E9PY46 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Ift140E9PY46 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Ift140E9PY46 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Ift140E9PY46 Gm13401-201ENSMUST00000117074 291 ntBASIC28.66■■■□□ 2.18
Ift140E9PY46 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ift140E9PY46 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ift140E9PY46 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ift140E9PY46 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Ift140E9PY46 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC28.65■■■□□ 2.18
Ift140E9PY46 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Ift140E9PY46 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ift140E9PY46 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ift140E9PY46 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Ift140E9PY46 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Ift140E9PY46 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Ift140E9PY46 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ift140E9PY46 Gm3272-201ENSMUST00000181181 1229 ntBASIC28.63■■■□□ 2.17
Ift140E9PY46 Mir8098-201ENSMUST00000184011 137 ntBASIC28.63■■■□□ 2.17
Ift140E9PY46 Gm10566-201ENSMUST00000086739 996 ntBASIC28.63■■■□□ 2.17
Ift140E9PY46 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ift140E9PY46 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ift140E9PY46 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ift140E9PY46 Mir770-201ENSMUST00000103252 94 ntBASIC28.62■■■□□ 2.17
Ift140E9PY46 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ift140E9PY46 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC28.62■■■□□ 2.17
Ift140E9PY46 Gm27459-201ENSMUST00000184860 107 ntBASIC28.62■■■□□ 2.17
Ift140E9PY46 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ift140E9PY46 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ift140E9PY46 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ift140E9PY46 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ift140E9PY46 Gm37722-201ENSMUST00000193757 208 ntBASIC28.61■■■□□ 2.17
Ift140E9PY46 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ift140E9PY46 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ift140E9PY46 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Ift140E9PY46 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ift140E9PY46 Gm26039-201ENSMUST00000158152 144 ntBASIC28.6■■■□□ 2.17
Ift140E9PY46 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC28.6■■■□□ 2.17
Ift140E9PY46 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ift140E9PY46 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ift140E9PY46 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ift140E9PY46 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ift140E9PY46 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ift140E9PY46 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
Ift140E9PY46 Gm5712-201ENSMUST00000199748 1043 ntBASIC28.59■■■□□ 2.17
Ift140E9PY46 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Golph3-202ENSMUST00000226517 2359 ntBASIC28.59■■■□□ 2.17
Ift140E9PY46 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Ift140E9PY46 Gm10418-201ENSMUST00000100943 576 ntBASIC28.59■■■□□ 2.17
Ift140E9PY46 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Gm37025-201ENSMUST00000195159 829 ntBASIC28.59■■■□□ 2.17
Ift140E9PY46 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC28.59■■■□□ 2.17
Ift140E9PY46 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ift140E9PY46 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ift140E9PY46 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ift140E9PY46 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ift140E9PY46 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms