Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm7153-201ENSMUST00000117092 455 ntBASIC25.45■■□□□ 1.66
Hfm1D3Z4R1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC25.45■■□□□ 1.66
Hfm1D3Z4R1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Hfm1D3Z4R1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 Gm9194-201ENSMUST00000220749 1447 ntBASIC25.43■■□□□ 1.66
Hfm1D3Z4R1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Gm13401-201ENSMUST00000117074 291 ntBASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Spsb2-203ENSMUST00000112473 1322 ntBASIC25.42■■□□□ 1.66
Hfm1D3Z4R1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Hfm1D3Z4R1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Hfm1D3Z4R1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Hfm1D3Z4R1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Hfm1D3Z4R1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Hfm1D3Z4R1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
Hfm1D3Z4R1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC25.39■■□□□ 1.66
Hfm1D3Z4R1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Hfm1D3Z4R1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Gm27357-201ENSMUST00000183754 135 ntBASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC25.38■■□□□ 1.65
Hfm1D3Z4R1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hfm1D3Z4R1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hfm1D3Z4R1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 Rncr4-201ENSMUST00000194541 2234 ntBASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 Gm37820-201ENSMUST00000194021 2147 ntBASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 AC133598.3-202ENSMUST00000224219 531 ntBASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hfm1D3Z4R1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Gm7213-201ENSMUST00000215977 950 ntBASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Il3ra-202ENSMUST00000223589 738 ntBASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Gm45906-201ENSMUST00000208911 1430 ntBASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC25.34■■□□□ 1.65
Hfm1D3Z4R1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC25.33■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms