Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Spcs1-204ENSMUST00000226782 949 ntBASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Golgb1-201ENSMUST00000023534 498 ntBASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Tgds-204ENSMUST00000228543 1594 ntBASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm12887B1AVM1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Gm12887B1AVM1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm12887B1AVM1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Gm9959-201ENSMUST00000068277 390 ntBASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm12887B1AVM1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm12887B1AVM1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm12887B1AVM1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms