Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.27■□□□□ 0.52
Gm5640A3KG49 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5640A3KG49 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm5640A3KG49 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.27■□□□□ 0.51
Gm5640A3KG49 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.27■□□□□ 0.51
Gm5640A3KG49 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm5640A3KG49 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Gm5640A3KG49 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.26■□□□□ 0.51
Gm5640A3KG49 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Spcs1-204ENSMUST00000226782 949 ntBASIC18.26■□□□□ 0.51
Gm5640A3KG49 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.26■□□□□ 0.51
Gm5640A3KG49 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5640A3KG49 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5640A3KG49 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.24■□□□□ 0.51
Gm5640A3KG49 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Golgb1-201ENSMUST00000023534 498 ntBASIC18.24■□□□□ 0.51
Gm5640A3KG49 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5640A3KG49 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.23■□□□□ 0.51
Gm5640A3KG49 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.23■□□□□ 0.51
Gm5640A3KG49 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5640A3KG49 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5640A3KG49 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.22■□□□□ 0.51
Gm5640A3KG49 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5640A3KG49 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms