Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col6a4A2AX52 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Gm28033-201ENSMUST00000184224 96 ntBASIC15.12■□□□□ 0.01
Col6a4A2AX52 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.12■□□□□ 0.01
Col6a4A2AX52 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Gm5587-201ENSMUST00000206270 674 ntBASIC15.12■□□□□ 0.01
Col6a4A2AX52 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.12■□□□□ 0.01
Col6a4A2AX52 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.11■□□□□ 0.01
Col6a4A2AX52 Gm14859-201ENSMUST00000117752 357 ntBASIC15.11■□□□□ 0.01
Col6a4A2AX52 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.11■□□□□ 0.01
Col6a4A2AX52 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.11■□□□□ 0.01
Col6a4A2AX52 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Gm12085-201ENSMUST00000119263 940 ntBASIC15.11■□□□□ 0.01
Col6a4A2AX52 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a4A2AX52 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Gm2274-201ENSMUST00000184539 609 ntBASIC15.1■□□□□ 0.01
Col6a4A2AX52 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.1■□□□□ 0.01
Col6a4A2AX52 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a4A2AX52 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.09■□□□□ 0.01
Col6a4A2AX52 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Gm44771-201ENSMUST00000206975 626 ntBASIC15.09■□□□□ 0.01
Col6a4A2AX52 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a4A2AX52 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms