Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC28.67■■■□□ 2.18
Shroom2A2ALU4 AC124569.2-201ENSMUST00000225998 818 ntBASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Shroom2A2ALU4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Gm43575-201ENSMUST00000196420 516 ntBASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shroom2A2ALU4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Gm7638-201ENSMUST00000121348 967 ntBASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Gm4974-201ENSMUST00000209974 875 ntBASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Shroom2A2ALU4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Shroom2A2ALU4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Shroom2A2ALU4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC28.64■■■□□ 2.18
Shroom2A2ALU4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Gm12895-201ENSMUST00000122214 226 ntBASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Gm9694-201ENSMUST00000193347 1189 ntBASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Shroom2A2ALU4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Shroom2A2ALU4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 AC161829.1-201ENSMUST00000220298 281 ntBASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shroom2A2ALU4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Gm10418-201ENSMUST00000100943 576 ntBASIC28.61■■■□□ 2.17
Shroom2A2ALU4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Gm10052-201ENSMUST00000168019 960 ntBASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Gm7729-201ENSMUST00000050143 801 ntBASIC28.61■■■□□ 2.17
Shroom2A2ALU4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC28.61■■■□□ 2.17
Shroom2A2ALU4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shroom2A2ALU4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC28.6■■■□□ 2.17
Shroom2A2ALU4 AC138767.1-201ENSMUST00000222661 415 ntBASIC28.6■■■□□ 2.17
Shroom2A2ALU4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shroom2A2ALU4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Shroom2A2ALU4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Shroom2A2ALU4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shroom2A2ALU4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shroom2A2ALU4 Gm23935-201ENSMUST00000102303 57 ntBASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Gm24270-201ENSMUST00000102326 57 ntBASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Gm24245-201ENSMUST00000157318 57 ntBASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Shroom2A2ALU4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Shroom2A2ALU4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC28.58■■■□□ 2.17
Shroom2A2ALU4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC28.58■■■□□ 2.17
Shroom2A2ALU4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC28.58■■■□□ 2.17
Shroom2A2ALU4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC28.58■■■□□ 2.17
Shroom2A2ALU4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Gm44544-201ENSMUST00000207052 1844 ntBASIC28.57■■■□□ 2.16
Shroom2A2ALU4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Gm15794-201ENSMUST00000120182 631 ntBASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 AC153889.1-201ENSMUST00000219257 330 ntBASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom2A2ALU4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC28.56■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 481.7 ms