Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm45141-201ENSMUST00000206502 1888 ntBASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Mir7075-201ENSMUST00000184187 82 ntBASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm27801-201ENSMUST00000184174 223 ntBASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv1-88A0A140T8N1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Smad6-203ENSMUST00000179458 273 ntBASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm8493-201ENSMUST00000196881 489 ntBASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv1-88A0A140T8N1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv1-88A0A140T8N1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv1-88A0A140T8N1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Igkv1-88A0A140T8N1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Fst-202ENSMUST00000223640 2612 ntBASIC11.89□□□□□ -0.51
Igkv1-88A0A140T8N1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm44832-201ENSMUST00000208849 2303 ntBASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms