Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Flg-201ENSMUST00000050758 1488 ntBASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm10698-201ENSMUST00000182663 604 ntBASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2aA0A0J9YTW6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2aA0A0J9YTW6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2aA0A0J9YTW6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Gm18025-201ENSMUST00000221733 862 ntBASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2aA0A0J9YTW6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm10812-201ENSMUST00000099864 546 ntBASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2aA0A0J9YTW6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2aA0A0J9YTW6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm38285-201ENSMUST00000192928 922 ntBASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.5■□□□□ 0.23
Scn2aA0A0J9YTW6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2aA0A0J9YTW6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms