Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Reep4-203ENSMUST00000226563 1444 ntBASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv29A0A0G2LB96 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.96□□□□□ -0.01
Trbv29A0A0G2LB96 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv29A0A0G2LB96 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv29A0A0G2LB96 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv29A0A0G2LB96 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv29A0A0G2LB96 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv29A0A0G2LB96 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.95□□□□□ -0.02
Trbv29A0A0G2LB96 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Gm22325-201ENSMUST00000158904 308 ntBASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv29A0A0G2LB96 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv29A0A0G2LB96 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv29A0A0G2LB96 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms