Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-3A0A075B648 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-3A0A075B648 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-3A0A075B648 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-3A0A075B648 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-3A0A075B648 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-3A0A075B648 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav12-3A0A075B648 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav12-3A0A075B648 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Gm11687-201ENSMUST00000118911 886 ntBASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-3A0A075B648 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-3A0A075B648 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms