Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-2A0A075B638 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-2A0A075B638 Gm11421-201ENSMUST00000122124 294 ntBASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav4-2A0A075B638 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Gm12922-201ENSMUST00000120626 809 ntBASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Gm9959-201ENSMUST00000068277 390 ntBASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Haglr-201ENSMUST00000100000 2085 ntBASIC14.26□□□□□ -0.13
Trav4-2A0A075B638 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Gm5812-201ENSMUST00000061073 957 ntBASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-2A0A075B638 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms