Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm15901-201ENSMUST00000117663 941 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm8692-201ENSMUST00000118102 438 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm12442-201ENSMUST00000118372 338 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm14054-201ENSMUST00000120744 704 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Mir7046-201ENSMUST00000183435 66 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm28586-201ENSMUST00000189857 456 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm19087-201ENSMUST00000191430 946 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm2602-201ENSMUST00000202112 571 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim3Q9R1R2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Mir711-201ENSMUST00000102188 82 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm13626-201ENSMUST00000119435 402 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm11879-201ENSMUST00000121885 702 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm24359-201ENSMUST00000158418 221 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms