Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm28584-201ENSMUST00000191489 696 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm38138-201ENSMUST00000193274 696 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm37991-201ENSMUST00000194297 696 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm42708-201ENSMUST00000196332 905 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm43354-201ENSMUST00000196862 346 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm5318-201ENSMUST00000205249 406 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm30646-201ENSMUST00000207662 180 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm44892-201ENSMUST00000208595 488 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm45473-201ENSMUST00000211452 616 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm18103-201ENSMUST00000216621 779 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm11360-201ENSMUST00000221898 262 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm22581-201ENSMUST00000083735 136 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Mir711-201ENSMUST00000102188 82 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm22284-201ENSMUST00000104132 132 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm13176-201ENSMUST00000117910 477 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm14747-201ENSMUST00000149888 984 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Mir1953-201ENSMUST00000157866 89 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm4152-201ENSMUST00000172675 259 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm18700-201ENSMUST00000185791 553 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm29551-201ENSMUST00000190913 698 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm37135-201ENSMUST00000192652 534 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm37901-201ENSMUST00000195107 514 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm43849-201ENSMUST00000201086 215 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm43850-201ENSMUST00000202021 578 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm18620-201ENSMUST00000222295 324 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lima1Q9ERG0 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms