Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm5612-201ENSMUST00000053326 375 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm26289-201ENSMUST00000104169 131 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm22371-201ENSMUST00000104588 130 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm25782-201ENSMUST00000122526 289 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm22820-201ENSMUST00000157205 329 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm23071-201ENSMUST00000158242 115 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm7152-201ENSMUST00000163570 605 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm26381-201ENSMUST00000174895 92 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm27460-201ENSMUST00000184213 100 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm37380-201ENSMUST00000193752 397 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Naip3-201ENSMUST00000118082 4208 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.87□□□□□ -1.31
Smc1aQ9CU62 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Smc1aQ9CU62 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm13679-201ENSMUST00000118678 484 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm13690-201ENSMUST00000118989 285 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm15621-201ENSMUST00000119162 364 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm13207-201ENSMUST00000119862 773 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm12229-201ENSMUST00000120487 468 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm17044-201ENSMUST00000168549 828 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm8506-201ENSMUST00000186661 829 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm6693-201ENSMUST00000189583 813 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm8860-201ENSMUST00000193160 445 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm37072-201ENSMUST00000194570 837 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 BC049739-201ENSMUST00000202626 660 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm44265-201ENSMUST00000203631 465 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms