Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm3242-201ENSMUST00000171273 485 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm27193-201ENSMUST00000184217 586 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Mir6362-201ENSMUST00000184329 107 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm9057-201ENSMUST00000198791 296 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm10705-201ENSMUST00000098980 461 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Use1Q9CQ56 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.69□□□□□ -1.5
Use1Q9CQ56 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.69□□□□□ -1.5
Use1Q9CQ56 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm22714-201ENSMUST00000116894 78 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm13493-201ENSMUST00000120318 493 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm12804-201ENSMUST00000121030 999 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm12101-201ENSMUST00000121590 390 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm23762-201ENSMUST00000158348 106 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm20480-201ENSMUST00000173953 250 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Mir7005-201ENSMUST00000185089 69 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm37265-201ENSMUST00000191698 885 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm20128-201ENSMUST00000196189 417 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm18940-201ENSMUST00000222518 871 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm2614-201ENSMUST00000223227 403 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms