Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm11256-201ENSMUST00000118109 829 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm4732-201ENSMUST00000118778 473 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm7212-201ENSMUST00000120817 348 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm12731-201ENSMUST00000120932 268 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm6977-201ENSMUST00000121568 512 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm15279-201ENSMUST00000155593 288 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm22235-201ENSMUST00000157085 110 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm25432-201ENSMUST00000158284 66 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm23343-201ENSMUST00000158964 143 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mir6989-201ENSMUST00000184812 65 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm28438-201ENSMUST00000188299 345 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm28586-201ENSMUST00000189857 456 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm43762-201ENSMUST00000201521 295 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm43929-201ENSMUST00000203025 409 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm44865-201ENSMUST00000207240 531 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm44554-201ENSMUST00000208738 147 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm7780-201ENSMUST00000214787 406 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Olfr844-201ENSMUST00000054106 930 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm15732-201ENSMUST00000079794 480 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm26442-201ENSMUST00000082588 153 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Msh4Q99MT2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.08□□□□□ -1.44
Msh4Q99MT2 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm25346-201ENSMUST00000104509 128 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm12565-201ENSMUST00000119004 649 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm7058-201ENSMUST00000119209 902 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm11341-201ENSMUST00000122316 447 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm5125-201ENSMUST00000148614 624 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm28507-201ENSMUST00000189737 703 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm37511-201ENSMUST00000192901 294 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm19104-201ENSMUST00000198392 679 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm9038-201ENSMUST00000203400 604 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm44837-201ENSMUST00000206863 717 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm18805-201ENSMUST00000206872 655 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm45070-201ENSMUST00000208100 246 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm45448-201ENSMUST00000211739 209 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm9535-201ENSMUST00000218499 768 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm5321-201ENSMUST00000072050 447 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gm22581-201ENSMUST00000083735 136 ntBASIC6.07□□□□□ -1.44
Msh4Q99MT2 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msh4Q99MT2 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Msh4Q99MT2 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms