Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm12807-201ENSMUST00000121546 962 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm14353-201ENSMUST00000122200 869 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm26023-201ENSMUST00000122722 313 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm22820-201ENSMUST00000157205 329 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm23756-201ENSMUST00000157582 114 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm22132-201ENSMUST00000175316 100 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Zfp950-206ENSMUST00000178819 171 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm9274-201ENSMUST00000182505 984 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm8614-201ENSMUST00000182528 978 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm8604-201ENSMUST00000183150 965 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm18350-201ENSMUST00000187395 955 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm8290-201ENSMUST00000218202 477 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm8137-201ENSMUST00000218997 463 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 AC114916.1-201ENSMUST00000228465 494 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm12842-201ENSMUST00000117298 476 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm12573-201ENSMUST00000118158 286 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm12387-201ENSMUST00000118573 955 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm14375-201ENSMUST00000119490 855 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm15030-201ENSMUST00000119804 484 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm11498-201ENSMUST00000120660 949 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm11882-201ENSMUST00000121463 506 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Mir1907-201ENSMUST00000122509 90 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm4997-201ENSMUST00000154056 360 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm6245-201ENSMUST00000164699 768 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm27299-201ENSMUST00000184593 103 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm37770-201ENSMUST00000192855 772 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms