Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm15011-201ENSMUST00000117724 1480 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm22492-201ENSMUST00000157192 297 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm23280-201ENSMUST00000157905 139 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm27006-201ENSMUST00000182218 943 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm7745-201ENSMUST00000182235 973 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm18427-201ENSMUST00000195422 515 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm43436-201ENSMUST00000199308 147 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm45596-201ENSMUST00000209279 434 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm6776-201ENSMUST00000057752 900 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 AC122769.3-201ENSMUST00000227739 3245 ntBASIC8.45□□□□□ -1.06
Usp47Q8BY87 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm12488-201ENSMUST00000122449 499 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 AC127242.4-201ENSMUST00000221242 470 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm6068-201ENSMUST00000222270 387 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Mir143-201ENSMUST00000083511 63 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Gm26163-201ENSMUST00000083792 178 ntBASIC8.44□□□□□ -1.06
Usp47Q8BY87 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Usp47Q8BY87 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Usp47Q8BY87 AC164297.2-201ENSMUST00000224388 1508 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp47Q8BY87 AC121960.2-201ENSMUST00000227349 3446 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm44416-201ENSMUST00000204055 2066 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm16270-201ENSMUST00000160327 3238 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm4234-201ENSMUST00000119747 714 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm7700-201ENSMUST00000120273 970 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm12293-201ENSMUST00000121898 590 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm22690-201ENSMUST00000175054 110 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm29124-201ENSMUST00000186576 452 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC8.43□□□□□ -1.06
Usp47Q8BY87 AC161586.1-201ENSMUST00000223232 547 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Gm16335-201ENSMUST00000077495 309 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC8.43□□□□□ -1.06
Usp47Q8BY87 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Usp47Q8BY87 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Gm37589-201ENSMUST00000193609 3994 ntBASIC8.42□□□□□ -1.06
Usp47Q8BY87 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.42□□□□□ -1.06
Usp47Q8BY87 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC8.42□□□□□ -1.06
Usp47Q8BY87 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC8.42□□□□□ -1.06
Usp47Q8BY87 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms