Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm25345-201ENSMUST00000104505 133 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm22710-201ENSMUST00000116892 125 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm8761-201ENSMUST00000121507 955 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm15279-201ENSMUST00000155593 288 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm22235-201ENSMUST00000157085 110 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm22724-201ENSMUST00000158091 127 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm6472-201ENSMUST00000178147 651 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm27004-201ENSMUST00000183300 727 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm28648-201ENSMUST00000190092 343 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm36997-201ENSMUST00000195090 707 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm31211-201ENSMUST00000199170 253 ntBASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Mir6374-201ENSMUST00000184003 107 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm19231-201ENSMUST00000193212 830 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm43744-201ENSMUST00000196387 688 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm44068-201ENSMUST00000204049 2128 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Gm9293-201ENSMUST00000223096 306 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC8.49□□□□□ -1.05
Usp40Q8BWR4 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp40Q8BWR4 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm11516-201ENSMUST00000118450 1582 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 AC164107.1-202ENSMUST00000228953 1816 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Mir449c-201ENSMUST00000102192 109 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm11105-201ENSMUST00000112781 478 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm14783-201ENSMUST00000118900 663 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm12308-201ENSMUST00000120440 389 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm15801-201ENSMUST00000120920 522 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm25445-201ENSMUST00000158996 299 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm8783-201ENSMUST00000159764 522 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm21772-201ENSMUST00000169213 478 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm17126-201ENSMUST00000172276 523 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm27024-201ENSMUST00000182561 755 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm27960-201ENSMUST00000183445 184 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm27861-201ENSMUST00000183920 214 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm8367-201ENSMUST00000186145 887 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm37774-201ENSMUST00000194401 245 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm43946-201ENSMUST00000204058 886 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm44940-201ENSMUST00000206225 1247 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm19116-201ENSMUST00000218592 642 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 AC161586.1-201ENSMUST00000223232 547 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm5471-201ENSMUST00000072732 337 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm5582-201ENSMUST00000075251 522 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm15011-201ENSMUST00000117724 1480 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms