Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm27193-201ENSMUST00000184217 586 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm29551-201ENSMUST00000190913 698 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm18103-201ENSMUST00000216621 779 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm19073-201ENSMUST00000219978 555 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Chmp2bQ8BJF9 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm22267-201ENSMUST00000104008 131 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm12713-201ENSMUST00000118404 764 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm25281-201ENSMUST00000157270 104 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm45628-201ENSMUST00000210849 274 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Mir3068-201ENSMUST00000083004 136 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp2bQ8BJF9 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 BC055308-201ENSMUST00000193380 2538 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Mir711-201ENSMUST00000102188 82 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm8250-201ENSMUST00000117398 774 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm13811-201ENSMUST00000117800 256 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm6884-201ENSMUST00000119318 615 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm14998-201ENSMUST00000120502 495 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm13024-201ENSMUST00000121756 718 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm14349-201ENSMUST00000137155 902 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm16269-201ENSMUST00000160532 409 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm44370-201ENSMUST00000175436 112 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm4332-201ENSMUST00000196114 346 ntBASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp2bQ8BJF9 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms