Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm7058-201ENSMUST00000119209 902 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm14716-201ENSMUST00000120138 718 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm13338-201ENSMUST00000120235 361 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm22642-201ENSMUST00000175352 252 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm7804-202ENSMUST00000194187 854 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm4602-201ENSMUST00000203198 308 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm44243-201ENSMUST00000204323 692 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm45628-201ENSMUST00000210849 274 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc40Q8BI79 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm25415-201ENSMUST00000104220 132 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm14489-201ENSMUST00000120868 901 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm23894-201ENSMUST00000158107 313 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm25904-201ENSMUST00000158491 143 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm16297-201ENSMUST00000161466 459 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm22701-201ENSMUST00000175371 291 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm9556-201ENSMUST00000182938 940 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm29385-201ENSMUST00000186831 363 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm29605-201ENSMUST00000190800 292 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm8869-201ENSMUST00000195222 947 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm7626-201ENSMUST00000195801 353 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm42646-201ENSMUST00000202233 914 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.41□□□□□ -1.38
Ccdc40Q8BI79 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc40Q8BI79 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Ccdc40Q8BI79 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc40Q8BI79 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.4□□□□□ -1.38
Ccdc40Q8BI79 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc40Q8BI79 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc40Q8BI79 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms