Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm28527-201ENSMUST00000185210 297 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm28428-201ENSMUST00000188886 697 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm20832-201ENSMUST00000189076 665 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm20871-201ENSMUST00000191322 931 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm17953-201ENSMUST00000192061 667 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm37979-201ENSMUST00000193065 712 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm17965-201ENSMUST00000193904 517 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm34015-201ENSMUST00000194908 451 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm30638-201ENSMUST00000195570 656 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm36728-201ENSMUST00000195782 665 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm43141-201ENSMUST00000199695 274 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm43295-201ENSMUST00000201439 412 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm2225-201ENSMUST00000209570 377 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm45608-201ENSMUST00000210948 389 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 AC124778.1-201ENSMUST00000216013 162 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC5.93□□□□□ -1.46
Col8a1Q00780 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm9973-202ENSMUST00000220926 166 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm46312-201ENSMUST00000220961 420 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 AC122309.1-201ENSMUST00000226945 421 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Mir296-201ENSMUST00000083587 79 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 BC055308-201ENSMUST00000193380 2538 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 AC154141.1-201ENSMUST00000208403 4136 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Col8a1Q00780 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm14373-201ENSMUST00000122467 2158 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm6913-201ENSMUST00000100019 348 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm11256-201ENSMUST00000118109 829 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm12099-201ENSMUST00000118660 750 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm14712-201ENSMUST00000120195 772 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 BC064078-201ENSMUST00000122939 570 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm27854-201ENSMUST00000175578 244 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm28414-201ENSMUST00000190111 294 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm18430-201ENSMUST00000197534 682 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm29815-201ENSMUST00000202418 178 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm42673-201ENSMUST00000202676 337 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm7946-201ENSMUST00000203326 958 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm44726-201ENSMUST00000203427 217 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms