Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
H3f3aP84244 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm8412-201ENSMUST00000077493 440 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Mir3068-201ENSMUST00000083004 136 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.4□□□□□ -1.55
H3f3aP84244 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.4□□□□□ -1.55
H3f3aP84244 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
H3f3aP84244 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3aP84244 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.4□□□□□ -1.55
H3f3aP84244 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.4□□□□□ -1.55
H3f3aP84244 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3aP84244 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3aP84244 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.4□□□□□ -1.55
H3f3aP84244 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3aP84244 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.4□□□□□ -1.55
H3f3aP84244 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3aP84244 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
H3f3aP84244 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm14515-201ENSMUST00000121327 216 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm6081-201ENSMUST00000134472 489 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm27512-201ENSMUST00000175328 126 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm26923-201ENSMUST00000182615 996 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm27004-201ENSMUST00000183300 727 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm3351-201ENSMUST00000193454 505 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm37463-201ENSMUST00000193819 796 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
H3f3aP84244 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3f3aP84244 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm18405-201ENSMUST00000220743 511 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.39□□□□□ -1.55
H3f3aP84244 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
H3f3aP84244 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.39□□□□□ -1.55
H3f3aP84244 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3aP84244 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
H3f3aP84244 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm24709-201ENSMUST00000104123 132 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm13114-201ENSMUST00000117605 106 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm13835-201ENSMUST00000118459 685 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm14580-201ENSMUST00000119122 718 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm6446-201ENSMUST00000120604 818 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms