Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cux1P53564 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 AC161884.1-201ENSMUST00000225436 2174 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Cux1P53564 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC9.21□□□□□ -0.93
Cux1P53564 Gm8595-201ENSMUST00000118250 630 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC9.21□□□□□ -0.93
Cux1P53564 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 Gm3307-201ENSMUST00000176164 632 ntBASIC9.21□□□□□ -0.93
Cux1P53564 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 Gm28188-201ENSMUST00000190483 236 ntBASIC9.21□□□□□ -0.93
Cux1P53564 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 Gm37838-201ENSMUST00000194464 312 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Gm18325-201ENSMUST00000203228 835 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Gm4374-201ENSMUST00000204929 424 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC9.21□□□□□ -0.93
Cux1P53564 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Cux1P53564 Gm19174-201ENSMUST00000216944 956 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Gm7042-201ENSMUST00000223027 384 ntBASIC9.21□□□□□ -0.93
Cux1P53564 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cux1P53564 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Cux1P53564 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cux1P53564 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Gm15877-201ENSMUST00000121897 964 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Gm24692-201ENSMUST00000157761 146 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Gm22993-201ENSMUST00000175423 254 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cux1P53564 Mir6994-201ENSMUST00000198985 73 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Gm7733-201ENSMUST00000199038 919 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Gm5554-201ENSMUST00000199726 1206 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Gm7838-201ENSMUST00000203221 1189 ntBASIC9.21□□□□□ -0.94
Cux1P53564 AC156950.1-201ENSMUST00000219604 456 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cux1P53564 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC9.21□□□□□ -0.94
Cux1P53564 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.2□□□□□ -0.94
Cux1P53564 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC9.2□□□□□ -0.94
Cux1P53564 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Cux1P53564 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Cux1P53564 Gm11774-201ENSMUST00000118601 293 ntBASIC9.2□□□□□ -0.94
Cux1P53564 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Gm19002-201ENSMUST00000192649 1012 ntBASIC9.2□□□□□ -0.94
Cux1P53564 Gm43779-201ENSMUST00000196691 829 ntBASIC9.2□□□□□ -0.94
Cux1P53564 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC9.2□□□□□ -0.94
Cux1P53564 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC9.2□□□□□ -0.94
Cux1P53564 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC9.2□□□□□ -0.94
Cux1P53564 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC9.2□□□□□ -0.94
Cux1P53564 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cux1P53564 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cux1P53564 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cux1P53564 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
Cux1P53564 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cux1P53564 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Gm37132-201ENSMUST00000195553 2238 ntBASIC9.19□□□□□ -0.94
Cux1P53564 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Gm45250-201ENSMUST00000209414 3592 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Lipe-203ENSMUST00000105177 1251 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Gm29596-201ENSMUST00000185710 385 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Gm37932-201ENSMUST00000192258 1167 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC9.19□□□□□ -0.94
Cux1P53564 Gm18587-201ENSMUST00000213736 841 ntBASIC9.19□□□□□ -0.94
Cux1P53564 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC9.19□□□□□ -0.94
Cux1P53564 Gm3785-201ENSMUST00000221000 202 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cux1P53564 Gm10064-201ENSMUST00000071235 399 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Cux1P53564 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms