Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm25387-201ENSMUST00000157813 132 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Shmt1P50431 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.72□□□□□ -1.33
Shmt1P50431 V1rg10-201ENSMUST00000183378 937 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Gm28917-201ENSMUST00000187294 237 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm28437-201ENSMUST00000190277 783 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm37103-201ENSMUST00000191830 115 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm9038-201ENSMUST00000203400 604 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm43992-201ENSMUST00000204358 197 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Gm2926-201ENSMUST00000205625 239 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.72□□□□□ -1.33
Shmt1P50431 Gm45485-201ENSMUST00000211229 357 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 AC120394.1-201ENSMUST00000217153 351 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 Platr25-208ENSMUST00000222602 939 ntBASIC6.72□□□□□ -1.33
Shmt1P50431 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Shmt1P50431 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Shmt1P50431 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Shmt1P50431 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.72□□□□□ -1.33
Shmt1P50431 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
Shmt1P50431 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Shmt1P50431 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Shmt1P50431 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Shmt1P50431 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Shmt1P50431 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Shmt1P50431 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.71□□□□□ -1.33
Shmt1P50431 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.71□□□□□ -1.33
Shmt1P50431 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.71□□□□□ -1.33
Shmt1P50431 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Shmt1P50431 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm14356-201ENSMUST00000118322 869 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm12442-201ENSMUST00000118372 338 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm14836-201ENSMUST00000118567 471 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm15616-201ENSMUST00000118662 375 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Mir1907-201ENSMUST00000122509 90 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm23441-201ENSMUST00000157268 127 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm25342-201ENSMUST00000157459 122 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm23896-201ENSMUST00000158109 130 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm28934-201ENSMUST00000186491 346 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm38214-201ENSMUST00000192581 988 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm8826-201ENSMUST00000193161 948 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm37993-201ENSMUST00000195301 988 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC6.71□□□□□ -1.34
Shmt1P50431 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm44091-201ENSMUST00000205212 649 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm18193-201ENSMUST00000210017 772 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm7780-201ENSMUST00000214787 406 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.71□□□□□ -1.34
Shmt1P50431 AC164597.2-201ENSMUST00000226738 603 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 AC132918.1-201ENSMUST00000227877 925 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Shmt1P50431 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Shmt1P50431 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Shmt1P50431 BC023105-201ENSMUST00000073997 1227 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm3563-201ENSMUST00000172963 1628 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.71□□□□□ -1.34
Shmt1P50431 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms