Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC7.17□□□□□ -1.26
Traf1P39428 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm8692-201ENSMUST00000118102 438 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm13469-201ENSMUST00000118231 350 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm11976-201ENSMUST00000119236 295 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm12244-201ENSMUST00000119500 291 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm13121-201ENSMUST00000120637 632 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm7931-201ENSMUST00000121537 271 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm15237-201ENSMUST00000122104 469 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm27468-201ENSMUST00000183577 106 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm28149-201ENSMUST00000187102 378 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm28768-201ENSMUST00000189034 378 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm17934-201ENSMUST00000192818 422 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm18952-201ENSMUST00000194471 846 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm43157-201ENSMUST00000198223 412 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm7166-201ENSMUST00000199715 303 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm44984-201ENSMUST00000207802 394 ntBASIC7.17□□□□□ -1.26
Traf1P39428 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.17□□□□□ -1.26
Traf1P39428 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm11360-201ENSMUST00000221898 262 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.17□□□□□ -1.26
Traf1P39428 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Traf1P39428 Olfr467-201ENSMUST00000084756 927 ntBASIC7.17□□□□□ -1.26
Traf1P39428 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Traf1P39428 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Traf1P39428 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Traf1P39428 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Gm12399-201ENSMUST00000121475 446 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Gm9027-201ENSMUST00000165914 661 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.16□□□□□ -1.26
Traf1P39428 Gm29650-201ENSMUST00000188485 742 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.16□□□□□ -1.26
Traf1P39428 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.16□□□□□ -1.26
Traf1P39428 Gm2040-201ENSMUST00000202979 289 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Gm44239-201ENSMUST00000204228 271 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Traf1P39428 Gm9088-201ENSMUST00000220237 508 ntBASIC7.16□□□□□ -1.26
Traf1P39428 AC132121.1-201ENSMUST00000220774 332 ntBASIC7.16□□□□□ -1.26
Traf1P39428 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Traf1P39428 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Gm7808-201ENSMUST00000082002 387 ntBASIC7.16□□□□□ -1.26
Traf1P39428 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
Traf1P39428 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Traf1P39428 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Traf1P39428 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
Traf1P39428 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Traf1P39428 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Traf1P39428 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Traf1P39428 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.15□□□□□ -1.26
Traf1P39428 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Gm16523-202ENSMUST00000203640 4750 ntBASIC7.15□□□□□ -1.26
Traf1P39428 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms