Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc11P31313 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.19□□□□□ -1.42
Hoxc11P31313 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxc11P31313 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc11P31313 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.19□□□□□ -1.42
Hoxc11P31313 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Hoxc11P31313 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.19□□□□□ -1.42
Hoxc11P31313 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc11P31313 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.19□□□□□ -1.42
Hoxc11P31313 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc11P31313 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.19□□□□□ -1.42
Hoxc11P31313 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc11P31313 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.19□□□□□ -1.42
Hoxc11P31313 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.19□□□□□ -1.42
Hoxc11P31313 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm24173-201ENSMUST00000104130 128 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm11256-201ENSMUST00000118109 829 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm14836-201ENSMUST00000118567 471 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm5133-201ENSMUST00000118940 1255 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxc11P31313 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm28011-201ENSMUST00000184097 175 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm27970-201ENSMUST00000184854 407 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm29385-201ENSMUST00000186831 363 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm28996-201ENSMUST00000190316 721 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxc11P31313 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm18805-201ENSMUST00000206872 655 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm4574-201ENSMUST00000207804 542 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm38574-201ENSMUST00000211855 640 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Hoxc11P31313 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.18□□□□□ -1.42
Hoxc11P31313 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc11P31313 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc11P31313 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Thap6-201ENSMUST00000191860 3151 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms